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Diffraction Changes

Powder Diffraction

New Algorithms

  • New algorithm SaveSampleEnvironmentAndShape to save out a sample shape and environment as a single STL file, this can be used to save out pieces with a set rotation or scale, or to assemble multiple stl files into one for viewing purposes.

Improvements

  • The Gem scripts can now be used to automatically generate a .cal file, similar to pearl. They can also adjust a parameter file passed in using the argument “calibration_to_adjust”.
  • Added two new options to the HRPD scripts do_solid_angle_corrections and subtract_empty_instrument allowing setting whether or not these actions should take place.
  • The Polaris scripts can now detect the chopper mode if none is provided using the frequency block logs.
  • The Pearl scripts now automatically disable attenuation on long-mode.
  • The Pearl scripts now set now use a spline coefficient of 5 on long-mode due to the increased amount of noise.
  • The Pearl scripts now crop to a dspacing of 8 on long-mode to avoid negative values caused by noise after this point.
  • New example mapping files for GEM and POLARIS have been added to the ISIS powder scripts.
  • SNSPowderReduction has a new property, OffsetData, which adds a constant to the data at the very end of the reduction.
  • BASISPowderDiffraction has a new property, RemoveTemp, which allows the user to inspect temporary workspaces is left unchecked.
  • LoadSampleEnvironment now correctly takes into account scale for translation. Rotation is now applied before translation to reduce confusion.
  • New IDF have been added for VULCAN.

Bug Fixes

  • HRPD Absorption corrections now correctly takes into account the thickness of the slab.
  • Pearl no longer produces an output of NaN when long-mode is changed after focusing.
  • Fixed a bug where enabling absorption corrections on GEM raised an error.
  • LoadILLDiffraction if fixed to load also single point scans.
  • AlignAndFocusPowderFromFiles no longer errors out if the first chunk has no events

Engineering Diffraction

Improvements

  • Changed focus to save out .his files in the format <run-number><instrument> as opposed to <run-number>_<instrument> to allow for better compatibility with opengenie.
  • Added sample environment file for POWGEN that includes many of the standard sample containers

Bug Fixes

  • Prevented crash caused by canceling algorithms called by GUI.
  • Prevented GUI breaking bug caused by entering files from the wrong instrument to calibration.
  • Prevented issue with reading CSV files on python 3
  • GUI now correctly loads the file browsed to instead of looking for a run number in every folder along the path to that file.
  • MDNorm will not crash if the detector is masked in the flux workspace, but not in the input workspace.

Single Crystal Diffraction

New Algorithms

  • New algorithm PredictSatellitePeaks to predict satellite peaks using modulation vectors and maximum order of satellite from PeaksWorkspace or range of wavelength and DSpacing.
  • New algorithm IndexPeaksWithSatellites to index peaks with satellites and set modulation vectors and maximum order of satellite from input values.

Improvements

  • LoadIsawPeaks will load satellite peaks using the order of each satellite by the hkl of the nuclear peak and the mnp of the satellite peak.
  • SaveIsawPeaks will save satellite peaks using the order of each satellite by the hkl of the nuclear peak and the mnp of the satellite peak.
  • FindUBUsingIndexedPeaks finds UB matrix using the indexed peaks, modulation vectors and maximum order of satellite from PeaksWorkspace.
  • IndexPeaks now will also index satellite peaks using modulation vectors and maximum order of satellite from PeaksWorkspace.
  • IntegrateEllipsoids will integrate peaks using the indexed peaks, modulation vectors and maximum order of satellite from PeaksWorkspace
  • DeltaPDF3D has a new method for peak removal, KAREN (K-space Algorithmic REconstructioN)
  • New TOPAZ instrument geometry for 2019B run cycle
  • Maximum order of modulated vectors is now available to python: ws.sample().getOrientedLattice().getMaxOrder()

Bug Fixes

  • MDNorm now checks for consistent binning between the given parameters and the input accumulation workspaces if the latter are given.
  • StatisticsOfPeaksWorkspace now only calculates statistics for integer HKL (not satellite peaks) instead of combining. Statistics for satellite peaks will be added later.

Release 4.1.0